GSE118614 10x
This is an analysis for the dataset GSE118614 made available by Clark BS et al. in their paper Single-cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
rm(list=ls())
gc() used (Mb) gc trigger (Mb) max used (Mb)
Ncells 762320 40.8 1309771 70 1309771 70.0
Vcells 1900104 14.5 8388608 64 2712788 20.7library(Matrix)Warning: package ‘Matrix’ was built under R version 4.3.2library(Seurat)Warning: package ‘Seurat’ was built under R version 4.3.2Loading required package: SeuratObject
Warning: package ‘SeuratObject’ was built under R version 4.3.2Loading required package: sp
The legacy packages maptools, rgdal, and rgeos, underpinning the sp package,
which was just loaded, were retired in October 2023.
Please refer to R-spatial evolution reports for details, especially
https://r-spatial.org/r/2023/05/15/evolution4.html.
It may be desirable to make the sf package available;
package maintainers should consider adding sf to Suggests:.
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grep, grepl, intersect, is.unsorted, lapply, Map, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank,
rbind, Reduce, rownames, sapply, setdiff, sort, table, tapply, union, unique, unsplit, which.max, which.min
Welcome to Bioconductor
Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for
packages 'citation("pkgname")'.
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colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, colProds,
colQuantiles, colRanges, colRanks, colSdDiffs, colSds, colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
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exprs, fData, fData<-, pData, pData<-library(SeuratWrappers)obj <- readRDS("../output-embeddings/gse118614_bcd.RDS")gene_table = read.table("../data/GSE118614/genes.tsv")
gmap = gene_table[['gene_short_name']]
names(gmap) <- rownames(gene_table)
gmapENSMUSG00000051951 ENSMUSG00000089699 ENSMUSG00000102343 ENSMUSG00000025900 ENSMUSG00000109048 ENSMUSG00000025902 ENSMUSG00000104328 ENSMUSG00000033845
"Xkr4" "Gm1992" "Gm37381" "Rp1" "Rp1" "Sox17" "Gm37323" "Mrpl15"
ENSMUSG00000025903 ENSMUSG00000104217 ENSMUSG00000033813 ENSMUSG00000002459 ENSMUSG00000085623 ENSMUSG00000033793 ENSMUSG00000025905 ENSMUSG00000033774
"Lypla1" "Gm37988" "Tcea1" "Rgs20" "Gm16041" "Atp6v1h" "Oprk1" "Npbwr1"
ENSMUSG00000025907 ENSMUSG00000090031 ENSMUSG00000087247 ENSMUSG00000033740 ENSMUSG00000051285 ENSMUSG00000097797 ENSMUSG00000103067 ENSMUSG00000025909
"Rb1cc1" "4732440D04Rik" "Fam150a" "St18" "Pcmtd1" "Gm26901" "Gm30414" "Sntg1"
ENSMUSG00000061024 ENSMUSG00000025911 ENSMUSG00000067879 ENSMUSG00000099827 ENSMUSG00000025912 ENSMUSG00000045210 ENSMUSG00000097893 ENSMUSG00000025915
"Rrs1" "Adhfe1" "3110035E14Rik" "Gm29520" "Mybl1" "Vcpip1" "1700034P13Rik" "Sgk3"
ENSMUSG00000046101 ENSMUSG00000098234 ENSMUSG00000099032 ENSMUSG00000025916 ENSMUSG00000087199 ENSMUSG00000025917 ENSMUSG00000056763 ENSMUSG00000067851
"Mcmdc2" "Snhg6" "Tcf24" "Ppp1r42" "Gm15818" "Cops5" "Cspp1" "Arfgef1"
ENSMUSG00000042501 ENSMUSG00000048960 ENSMUSG00000057715 ENSMUSG00000097171 ENSMUSG00000101314 ENSMUSG00000016918 ENSMUSG00000025938 ENSMUSG00000099498
"Cpa6" "Prex2" "A830018L16Rik" "Gm17644" "Gm29663" "Sulf1" "Slco5a1" "Gm29283"
ENSMUSG00000042414 ENSMUSG00000005886 ENSMUSG00000101476 ENSMUSG00000025935 ENSMUSG00000025937 ENSMUSG00000067813 ENSMUSG00000025932 ENSMUSG00000054493
"Prdm14" "Ncoa2" "Gm29570" "Tram1" "Lactb2" "Xkr9" "Eya1" "Gm9947"
ENSMUSG00000025930 ENSMUSG00000032769 ENSMUSG00000092083 ENSMUSG00000025925 ENSMUSG00000032719 ENSMUSG00000067795 ENSMUSG00000043716 ENSMUSG00000025921
"Msc" "Trpa1" "Kcnb2" "Terf1" "Sbspon" "4930444P10Rik" "Rpl7" "Rdh10"
ENSMUSG00000100868 ENSMUSG00000025920 ENSMUSG00000089982 ENSMUSG00000025939 ENSMUSG00000079658 ENSMUSG00000097744 ENSMUSG00000025940 ENSMUSG00000025779
"Gm28095" "Stau2" "Gm7568" "Ube2w" "Tceb1" "D030040B21Rik" "Tmem70" "Ly96"
ENSMUSG00000101640 ENSMUSG00000042686 ENSMUSG00000100110 ENSMUSG00000025777 ENSMUSG00000099899 ENSMUSG00000067780 ENSMUSG00000100053 ENSMUSG00000085125
"Gm28376" "Jph1" "Gm28783" "Gdap1" "Gm28784" "Pi15" "Gm28154" "Gm16070"
ENSMUSG00000025776 ENSMUSG00000099895 ENSMUSG00000025774 ENSMUSG00000073735 ENSMUSG00000067773 ENSMUSG00000101738 ENSMUSG00000089787 ENSMUSG00000042596
"Crispld1" "Gm28153" "Crisp4" "Defb18" "Defb41" "Gm29006" "Gm15825" "Tfap2d"
ENSMUSG00000025927 ENSMUSG00000100538 ENSMUSG00000043760 ENSMUSG00000089914 ENSMUSG00000099906 ENSMUSG00000025929 ENSMUSG00000041872 ENSMUSG00000041859
"Tfap2b" "Gm28340" "Pkhd1" "4930486I03Rik" "Gm28653" "Il17a" "Il17f" "Mcm3"
ENSMUSG00000102121 ENSMUSG00000097934 ENSMUSG00000025931 ENSMUSG00000041809 ENSMUSG00000041779 ENSMUSG00000099971 ENSMUSG00000025933 ENSMUSG00000025934
"Gm28065" "6720483E21Rik" "Paqr8" "Efhc1" "Tram2" "Gm28287" "Tmem14a" "Gsta3"
ENSMUSG00000099343 ENSMUSG00000067750 ENSMUSG00000041722 ENSMUSG00000085079 ENSMUSG00000028033 ENSMUSG00000097109 ENSMUSG00000041670 ENSMUSG00000073730
"Gm28836" "Khdc1a" "Khdc1c" "Khdc1b" "Kcnq5" "Gm26580" "Rims1" "4933415F23Rik"
ENSMUSG00000097970 ENSMUSG00000100775 ENSMUSG00000026158 ENSMUSG00000099503 ENSMUSG00000026156 ENSMUSG00000026155 ENSMUSG00000026154 ENSMUSG00000026153
"Gm27028" "Gm29107" "Ogfrl1" "Gm28822" "B3gat2" "Smap1" "Sdhaf4" "Fam135a"
ENSMUSG00000026147 ENSMUSG00000026141 ENSMUSG00000073725 ENSMUSG00000100483 ENSMUSG00000099392 ENSMUSG00000033569 ENSMUSG00000073722 ENSMUSG00000101514
"Col9a1" "Col19a1" "Lmbrd1" "Gm28237" "Gm29414" "Adgrb3" "4931408C20Rik" "Gm5524"
ENSMUSG00000048411 ENSMUSG00000053185 ENSMUSG00000048874 ENSMUSG00000026064 ENSMUSG00000100371 ENSMUSG00000100237 ENSMUSG00000086727 ENSMUSG00000100910
"Gm597" "Gm9898" "Phf3" "Ptp4a1" "Gm29669" "Gm28644" "4931428L18Rik" "Gm29128"
ENSMUSG00000050217 ENSMUSG00000026063 ENSMUSG00000026058 ENSMUSG00000091318 ENSMUSG00000102917 ENSMUSG00000104230 ENSMUSG00000026134 ENSMUSG00000004768
"Lgsn" "Pih1d3" "Khdrbs2" "Gm5415" "Gm37724" "Gm37591" "Prim2" "Rab23"
ENSMUSG00000042215 ENSMUSG00000042197 ENSMUSG00000042182 ENSMUSG00000026131 ENSMUSG00000104397 ENSMUSG00000102336 ENSMUSG00000042111 ENSMUSG00000101711
"Bag2" "Zfp451" "Bend6" "Dst" "Gm37958" "Gm37233" "Ccdc115" "Gm28306"
ENSMUSG00000026127 ENSMUSG00000026126 ENSMUSG00000101223 ENSMUSG00000026125 ENSMUSG00000026124 ENSMUSG00000037529 ENSMUSG00000045815 ENSMUSG00000045174
"Imp4" "Ptpn18" "4930568A12Rik" "Prss39" "Cfc1" "Prss40" "1700101I19Rik" "Amer3"
ENSMUSG00000037509 ENSMUSG00000104002 ENSMUSG00000037503 ENSMUSG00000026123 ENSMUSG00000104417 ENSMUSG00000101714 ENSMUSG00000102531 ENSMUSG00000102279
"Arhgef4" "Gm38336" "Fam168b" "Plekhb2" "Gm37068" "Gm28415" "1110002O04Rik" "Gm37146"
ENSMUSG00000103708 ENSMUSG00000104201 ENSMUSG00000045216 ENSMUSG00000104523 ENSMUSG00000102202 ENSMUSG00000037470 ENSMUSG00000047180 ENSMUSG00000037447
"Gm33222" "4930535G08Rik" "Hs6st1" "Gm37335" "Gm33280" "Uggt1" "Neurl3" "Arid5a"
ENSMUSG00000102762 ENSMUSG00000010453 ENSMUSG00000037432 ENSMUSG00000001143 ENSMUSG00000037408 ENSMUSG00000001138 ENSMUSG00000102845 ENSMUSG00000067653
"4930403P22Rik" "Kansl3" "Fer1l5" "Lman2l" "Cnnm4" "Cnnm3" "Gm38033" "Ankrd23"
ENSMUSG00000109510 ENSMUSG00000079610 ENSMUSG00000026121 ENSMUSG00000046337 ENSMUSG00000061518 ENSMUSG00000037351 ENSMUSG00000102416 ENSMUSG00000104237
"Gm43543" "Ankrd39" "Sema4c" "Fam178b" "Cox5b" "Actr1b" "4933424G06Rik" "Gm33533"
ENSMUSG00000026117 ENSMUSG00000026116 ENSMUSG00000050122 ENSMUSG00000103603 ENSMUSG00000026114 ENSMUSG00000026113 ENSMUSG00000086064 ENSMUSG00000026112
"Zap70" "Tmem131" "Vwa3b" "Gm37020" "Cnga3" "Inpp4a" "4930439A04Rik" "Coa5"
ENSMUSG00000026111 ENSMUSG00000026110 ENSMUSG00000026090 ENSMUSG00000089767 ENSMUSG00000060771 ENSMUSG00000097268 ENSMUSG00000037216 ENSMUSG00000026088
"Unc50" "Mgat4a" "2010300C02Rik" "4930556I23Rik" "Tsga10" "Gm26805" "Lipt1" "Mitd1"
ENSMUSG00000026087 ENSMUSG00000061584 ENSMUSG00000087374 ENSMUSG00000026085 ENSMUSG00000058407 ENSMUSG00000026083 ENSMUSG00000026082 ENSMUSG00000102716
"Mrpl30" "Lyg2" "Gm15457" "Lyg1" "Txndc9" "Eif5b" "Rev1" "Gm5099"
ENSMUSG00000037138 ENSMUSG00000085391 ENSMUSG00000085280 ENSMUSG00000087131 ENSMUSG00000048814 ENSMUSG00000026080 ENSMUSG00000103647 ENSMUSG00000067604
"Aff3" "Gm16150" "Gm16151" "Gm16152" "Lonrf2" "Chst10" "Gm37707" "Nms"
ENSMUSG00000026078 ENSMUSG00000104188 ENSMUSG00000026077 ENSMUSG00000073702 ENSMUSG00000003134 ENSMUSG00000003135 ENSMUSG00000048234 ENSMUSG00000050967
"Pdcl3" "Gm37821" "Npas2" "Rpl31" "Tbc1d8" "Cnot11" "Rnf149" "Creg2"
ENSMUSG00000097083 ENSMUSG00000057173 ENSMUSG00000091937 ENSMUSG00000101634 ENSMUSG00000026074 ENSMUSG00000026073 ENSMUSG00000097899 ENSMUSG00000026072
"D930019O06Rik" "Rfx8" "Gm3646" "1700066B17Rik" "Map4k4" "Il1r2" "Gm16894" "Il1r1"
ENSMUSG00000070942 ENSMUSG00000026069 ENSMUSG00000026070 ENSMUSG00000026068 ENSMUSG00000104441 ENSMUSG00000026065 ENSMUSG00000026062 ENSMUSG00000103679
"Il1rl2" "Il1rl1" "Il18r1" "Il18rap" "Gm35801" "Slc9a4" "Slc9a2" "Gm37623"
ENSMUSG00000103270 ENSMUSG00000041945 ENSMUSG00000079588 ENSMUSG00000104072 ENSMUSG00000100185 ENSMUSG00000100832 ENSMUSG00000053640 ENSMUSG00000101919
"Gm37915" "Mfsd9" "Tmem182" "4930448I06Rik" "Gm28634" "Gm29260" "Gm9915" "Gm29664"
ENSMUSG00000101299 ENSMUSG00000100180 ENSMUSG00000060424 ENSMUSG00000045515 ENSMUSG00000099784 ENSMUSG00000060679 ENSMUSG00000041907 ENSMUSG00000070939
"Gm28175" "Gm28140" "Pantr1" "Pou3f3" "Dalir" "Mrps9" "Gpr45" "Tgfbrap1"
ENSMUSG00000100269 ENSMUSG00000041878 ENSMUSG00000010290 ENSMUSG00000008136 ENSMUSG00000099576 ENSMUSG00000066877 ENSMUSG00000026051 ENSMUSG00000100764
"Gm28782" "8430432A02Rik" "AI597479" "Fhl2" "Gm29040" "Nck2" "1500015O10Rik" "Gm29155"
ENSMUSG00000100635 ENSMUSG00000100480 ENSMUSG00000057363 ENSMUSG00000041763 ENSMUSG00000047343 ENSMUSG00000091844 ENSMUSG00000026049 ENSMUSG00000026047
"Gm29157" "Gm29156" "Uxs1" "Tpp2" "Mettl21c" "Gm8251" "Tex30" "Kdelc1"
ENSMUSG00000041684 ENSMUSG00000026048 ENSMUSG00000046828 ENSMUSG00000056870 ENSMUSG00000101701 ENSMUSG00000026043 ENSMUSG00000026042 ENSMUSG00000025995
"Bivm" "Ercc5" "Mettl21e" "Gulp1" "4930521E06Rik" "Col3a1" "Col5a2" "Wdr75"
ENSMUSG00000098549 ENSMUSG00000025993 ENSMUSG00000041144 ENSMUSG00000101337 ENSMUSG00000025986 ENSMUSG00000100213 ENSMUSG00000101447 ENSMUSG00000051616
"Gm5269" "Slc40a1" "Dnah7b" "Dnah7c" "Slc39a10" "Gm28151" "Gm28826" "C230029F24Rik"
ENSMUSG00000099608 ENSMUSG00000100451 ENSMUSG00000100816 ENSMUSG00000026109 ENSMUSG00000100671 ENSMUSG00000101242 ENSMUSG00000099625 ENSMUSG00000101799
"4933411E06Rik" "Gm29665" "Gm28321" "Tmeff2" "Gm28322" "Gm28319" "Gm29325" "9330175M20Rik"
ENSMUSG00000045954 ENSMUSG00000101702 ENSMUSG00000026107 ENSMUSG00000099413 ENSMUSG00000101741 ENSMUSG00000018417 ENSMUSG00000062939 ENSMUSG00000026104
"Sdpr" "1700072G22Rik" "Nabp1" "Gm17767" "Gm28055" "Myo1b" "Stat4" "Stat1"
ENSMUSG00000026103 ENSMUSG00000002881 ENSMUSG00000100120 ENSMUSG00000099878 ENSMUSG00000043015 ENSMUSG00000041439 ENSMUSG00000026102 ENSMUSG00000041426
"Gls" "Nab1" "Gm553" "Gm28178" "Tmem194b" "Mfsd6" "Inpp1" "Hibch"
ENSMUSG00000043629 ENSMUSG00000026100 ENSMUSG00000060715 ENSMUSG00000026098 ENSMUSG00000100763 ENSMUSG00000026097 ENSMUSG00000100679 ENSMUSG00000026096
"1700019D03Rik" "Mstn" "1700019A02Rik" "Pms1" "Gm28777" "Ormdl1" "Gm28778" "Osgepl1"
ENSMUSG00000099913 ENSMUSG00000026095 ENSMUSG00000096141 ENSMUSG00000026094 ENSMUSG00000042807 ENSMUSG00000025983 ENSMUSG00000041303 ENSMUSG00000073678
"Gm28551" "Asnsd1" "Dnah7a" "Stk17b" "Hecw2" "Ccdc150" "Gtf3c3" "Pgap1"
ENSMUSG00000052331 ENSMUSG00000101674 ENSMUSG00000025982 ENSMUSG00000025981 ENSMUSG00000025980 ENSMUSG00000073676 ENSMUSG00000025979 ENSMUSG00000025978
"Ankrd44" "4930444A19Rik" "Sf3b1" "Coq10b" "Hspd1" "Hspe1" "Mob4" "Rftn2"
ENSMUSG00000097649 ENSMUSG00000046994 ENSMUSG00000025977 ENSMUSG00000038349 ENSMUSG00000099950 ENSMUSG00000100372 ENSMUSG00000101332 ENSMUSG00000045336
"Gm10561" "Mars2" "Boll" "Plcl1" "9130227L01Rik" "1700003I22Rik" "Gm28240" "Hsfy2"
ENSMUSG00000038331 ENSMUSG00000099945 ENSMUSG00000101429 ENSMUSG00000097519 ENSMUSG00000038323 ENSMUSG00000048495 ENSMUSG00000025971 ENSMUSG00000038305
"Satb2" "1700126A01Rik" "BC055402" "4930558J18Rik" "1700066M21Rik" "Tyw5" "9430016H08Rik" "Spats2l"
ENSMUSG00000091283 ENSMUSG00000054770 ENSMUSG00000026039 ENSMUSG00000063558 ENSMUSG00000064294 ENSMUSG00000038242 ENSMUSG00000089822 ENSMUSG00000079554
"Gm17234" "Kctd18" "Sgol2a" "Aox1" "Aox3" "Aox4" "Gm15759" "Aox2"
ENSMUSG00000051223 ENSMUSG00000026034 ENSMUSG00000026035 ENSMUSG00000026036 ENSMUSG00000026037 ENSMUSG00000085054 ENSMUSG00000038174 ENSMUSG00000026032
"Bzw1" "Clk1" "Ppil3" "Nif3l1" "Orc2" "Gm15834" "Fam126b" "Ndufb3"
ENSMUSG00000047528 ENSMUSG00000026031 ENSMUSG00000026029 ENSMUSG00000026028 ENSMUSG00000026027 ENSMUSG00000099752 ENSMUSG00000072295 ENSMUSG00000038079
"Als2cr12" "Cflar" "Casp8" "Trak2" "Stradb" "Gm29018" "Als2cr11" "Tmem237"
ENSMUSG00000097573 ENSMUSG00000079550 ENSMUSG00000101586 ENSMUSG00000026024 ENSMUSG00000026023 ENSMUSG00000099922 ENSMUSG00000041075 ENSMUSG00000097819
"G730003C15Rik" "Mpp4" "Gm29017" "Als2" "Cdk15" "Gm29016" "Fzd7" "Gm26813"
ENSMUSG00000047361 ENSMUSG00000099811 ENSMUSG00000101409 ENSMUSG00000026021 ENSMUSG00000026020 ENSMUSG00000067336 ENSMUSG00000041040 ENSMUSG00000026018
"Gm973" "Gm28411" "1700122D07Rik" "Sumo1" "Nop58" "Bmpr2" "Fam117b" "Ica1l"
ENSMUSG00000026019 ENSMUSG00000026017 ENSMUSG00000073664 ENSMUSG00000049439 ENSMUSG00000026782 ENSMUSG00000026014 ENSMUSG00000026012 ENSMUSG00000086795
"Wdr12" "Carf" "Nbeal1" "Cyp20a1" "Abi2" "Raph1" "Cd28" "Gm11579"
ENSMUSG00000085965 ENSMUSG00000026011 ENSMUSG00000026009 ENSMUSG00000100893 ENSMUSG00000085248 ENSMUSG00000085447 ENSMUSG00000086408 ENSMUSG00000100965
"2310016D23Rik" "Ctla4" "Icos" "Gm28083" "Gm11587" "9530026F06Rik" "Gm11588" "Gm28449"
ENSMUSG00000086009 ENSMUSG00000052062 ENSMUSG00000085842 ENSMUSG00000085019 ENSMUSG00000085400 ENSMUSG00000100750 ENSMUSG00000025969 ENSMUSG00000100811
"4930587A21Rik" "Pard3b" "Pard3bos1" "Pard3bos2" "Pard3bos3" "Gm29084" "Nrp2" "Gm29083"
ENSMUSG00000100426 ENSMUSG00000040865 ENSMUSG00000084799 ENSMUSG00000101599 ENSMUSG00000025968 ENSMUSG00000025967 ENSMUSG00000046856 ENSMUSG00000087561
"Gm4208" "Ino80d" "Ino80dos" "Gm20342" "Ndufs1" "Eef1b2" "Gpr1" "Gm11608"
ENSMUSG00000027520 ENSMUSG00000025964 ENSMUSG00000069085 ENSMUSG00000025963 ENSMUSG00000025962 ENSMUSG00000025961 ENSMUSG00000044689 ENSMUSG00000025959
"Zdbf2" "Adam23" "Dytn" "Mdh1b" "Fastkd2" "4933402D24Rik" "Gm13749" "Klf7"
ENSMUSG00000097272 ENSMUSG00000086836 ENSMUSG00000101895 ENSMUSG00000025958 ENSMUSG00000025956 ENSMUSG00000101832 ENSMUSG00000100437 ENSMUSG00000070871
"Gm26649" "Gm13748" "Gm28981" "Creb1" "Mettl21a" "Gm28982" "Gm29152" "Ccnyl1"
ENSMUSG00000045005 ENSMUSG00000051344 ENSMUSG00000025955 ENSMUSG00000070870 ENSMUSG00000067299 ENSMUSG00000025952 ENSMUSG00000073658 ENSMUSG00000044429
"Fzd5" "Plekhm3" "Akr1cl" "Cryge" "Crygd" "Crygc" "Crygb" "Cryga"
ENSMUSG00000100846 ENSMUSG00000044816 ENSMUSG00000025950 ENSMUSG00000025949 ENSMUSG00000025946 ENSMUSG00000025945 ENSMUSG00000015222 ENSMUSG00000073656
"Gm28845" "D630023F18Rik" "Idh1" "Pikfyve" "Pth2r" "Crygf" "Map2" "Gm10558"
ENSMUSG00000055567 ENSMUSG00000026005 ENSMUSG00000026004 ENSMUSG00000026003 ENSMUSG00000061816 ENSMUSG00000026000 ENSMUSG00000025991 ENSMUSG00000086204
"Unc80" "Rpe" "Kansl1l" "Acadl" "Myl1" "Lancl1" "Cps1" "Gm15668"
ENSMUSG00000085075 ENSMUSG00000087329 ENSMUSG00000062209 ENSMUSG00000099804 ENSMUSG00000100354 ENSMUSG00000101156 ENSMUSG00000025997 ENSMUSG00000053153
"Gm15669" "Gm15671" "Erbb4" "Gm28497" "Gm29113" "Gm29114" "Ikzf2" "Spag16"
ENSMUSG00000045648 ENSMUSG00000026196 ENSMUSG00000050296 ENSMUSG00000026192 ENSMUSG00000026193 ENSMUSG00000073652 ENSMUSG00000099707 ENSMUSG00000101211
"Vwc2l" "Bard1" "Abca12" "Atic" "Fn1" "Apol7d" "Gm8883" "Gm28818"
ENSMUSG00000101848 ENSMUSG00000101764 ENSMUSG00000102123 ENSMUSG00000039395 ENSMUSG00000097131 ENSMUSG00000026189 ENSMUSG00000026188 ENSMUSG00000026187
"4933417E11Rik" "4930556G22Rik" "Gm4319" "Mreg" "D230017M19Rik" "Pecr" "Tmem169" "Xrcc5"
ENSMUSG00000039372 ENSMUSG00000039354 ENSMUSG00000039342 ENSMUSG00000046330 ENSMUSG00000039323 ENSMUSG00000026185 ENSMUSG00000101968 ENSMUSG00000026182
"March4" "Smarcal1" "Ankar" "Rpl37a" "Igfbp2" "Igfbp5" "1700027A15Rik" "Tnp1"
ENSMUSG00000101112 ENSMUSG00000099877 ENSMUSG00000101812 ENSMUSG00000100444 ENSMUSG00000100429 ENSMUSG00000100301 ENSMUSG00000101344 ENSMUSG00000055322
"Gm29185" "Pinc" "D530049I02Rik" "C530043A13Rik" "Gm29186" "6030407O03Rik" "Gm29183" "Tns1"
ENSMUSG00000061815 ENSMUSG00000026180 ENSMUSG00000048480 ENSMUSG00000006304 ENSMUSG00000064272 ENSMUSG00000006299 ENSMUSG00000101503 ENSMUSG00000026179
"Rufy4" "Cxcr2" "Cxcr1" "Arpc2" "Gpbar1" "Aamp" "Gm28364" "Pnkd"
ENSMUSG00000006301 ENSMUSG00000073650 ENSMUSG00000026177 ENSMUSG00000026176 ENSMUSG00000026175 ENSMUSG00000033364 ENSMUSG00000026174 ENSMUSG00000026173
"Tmbim1" "Catip" "Slc11a1" "Ctdsp1" "Vil1" "Usp37" "Rqcd1" "Plcd4"
ENSMUSG00000026135 ENSMUSG00000026172 ENSMUSG00000026171 ENSMUSG00000033276 ENSMUSG00000033257 ENSMUSG00000026170 ENSMUSG00000006542 ENSMUSG00000033227
"Zfp142" "Bcs1l" "Rnf25" "Stk36" "Ttll4" "Cyp27a1" "Prkag3" "Wnt6"
ENSMUSG00000099472 ENSMUSG00000026167 ENSMUSG00000090071 ENSMUSG00000055197 ENSMUSG00000006546 ENSMUSG00000047021 ENSMUSG00000089653 ENSMUSG00000006538
"Gm29539" "Wnt10a" "Cdk5r2" "Fev" "Cryba2" "Ccdc108" "Gm15841" "Ihh"
ENSMUSG00000026162 ENSMUSG00000026205 ENSMUSG00000033159 ENSMUSG00000049339 ENSMUSG00000026197 ENSMUSG00000026198 ENSMUSG00000033124 ENSMUSG00000026199
"Nhej1" "Slc23a3" "Cnppd1" "Fam134a" "Zfand2b" "Abcb6" "Atg9a" "Ankzf1"
ENSMUSG00000026200 ENSMUSG00000026201 ENSMUSG00000026202 ENSMUSG00000096094 ENSMUSG00000026203 ENSMUSG00000026204 ENSMUSG00000101840 ENSMUSG00000033061
"Glb1l" "Stk16" "Tuba4a" "A630095N17Rik" "Dnajb2" "Ptprn" "Gm28294" "Resp18"
ENSMUSG00000100556 ENSMUSG00000026209 ENSMUSG00000026208 ENSMUSG00000085653 ENSMUSG00000026207 ENSMUSG00000086053 ENSMUSG00000033021 ENSMUSG00000033007
"Gm28902" "Dnpep" "Des" "Gm15179" "Speg" "Gm15178" "Gmppa" "Asic4"
ENSMUSG00000032997 ENSMUSG00000026211 ENSMUSG00000051703 ENSMUSG00000032968 ENSMUSG00000026213 ENSMUSG00000006576 ENSMUSG00000099996 ENSMUSG00000100827
"Chpf" "Obsl1" "Tmem198" "Inha" "Stk11ip" "Slc4a3" "Gm29065" "Gm29069"
ENSMUSG00000100553 ENSMUSG00000100534 ENSMUSG00000026235 ENSMUSG00000101849 ENSMUSG00000102052 ENSMUSG00000004872 ENSMUSG00000032908 ENSMUSG00000099561
"Gm17751" "Gm816" "Epha4" "Gm28386" "Gm28387" "Pax3" "Sgpp2" "Gm28410"
ENSMUSG00000026245 ENSMUSG00000090486 ENSMUSG00000012187 ENSMUSG00000099364 ENSMUSG00000100562 ENSMUSG00000032883 ENSMUSG00000079470 ENSMUSG00000099706
"Farsb" "BC035947" "Mogat1" "5730419F03Rik" "Gm29611" "Acsl3" "Utp14b" "Gm29536"
ENSMUSG00000047330 ENSMUSG00000101324 ENSMUSG00000050711 ENSMUSG00000054702 ENSMUSG00000073643 ENSMUSG00000026248 ENSMUSG00000026249 ENSMUSG00000099552
"Kcne4" "Gm29187" "Scg2" "Ap1s3" "Wdfy1" "Mrpl44" "Serpine2" "9830004L10Rik"
ENSMUSG00000043230 ENSMUSG00000101257 ENSMUSG00000004364 ENSMUSG00000101722 ENSMUSG00000101483 ENSMUSG00000038608 ENSMUSG00000054976 ENSMUSG00000055980
"Fam124b" "2310015K22Rik" "Cul3" "Gm29125" "1700016L21Rik" "Dock10" "Nyap2" "Irs1"
ENSMUSG00000022591 ENSMUSG00000026142 ENSMUSG00000100786 ENSMUSG00000067158 ENSMUSG00000079465 ENSMUSG00000026150 ENSMUSG00000026149 ENSMUSG00000100170
"Gm9747" "Rhbdd1" "Gm28940" "Col4a4" "Col4a3" "Mff" "Tm4sf20" "Gm28942"
ENSMUSG00000026159 ENSMUSG00000038496 ENSMUSG00000100190 ENSMUSG00000101315 ENSMUSG00000026166 ENSMUSG00000053161 ENSMUSG00000026163 ENSMUSG00000100580
"Agfg1" "Slc19a3" "Krtap28-10" "Krtap28-13" "Ccl20" "Daw1" "Sphkap" "4933436I20Rik"
ENSMUSG00000045658 ENSMUSG00000036766 ENSMUSG00000026219 ENSMUSG00000073633 ENSMUSG00000026220 ENSMUSG00000052477 ENSMUSG00000089844 ENSMUSG00000073631
"Pid1" "Dner" "Trip12" "Fbxo36" "Slc16a14" "C130026I21Rik" "A530032D15Rik" "Gm10553"
ENSMUSG00000072109 ENSMUSG00000090252 ENSMUSG00000089652 ENSMUSG00000089714 ENSMUSG00000094127 ENSMUSG00000070034 ENSMUSG00000090103 ENSMUSG00000070031
"A530040E14Rik" "Gm16028" "Gm16025" "Gm16092" "G530012D18Rik" "Sp110" "Gm16094" "Sp140"
ENSMUSG00000073628 ENSMUSG00000090246 ENSMUSG00000026222 ENSMUSG00000052760 ENSMUSG00000100217 ENSMUSG00000036707 ENSMUSG00000026223 ENSMUSG00000026224
"Gm10552" "Gm17017" "Sp100" "A630001G21Rik" "9930111H07Rik" "Cab39" "Itm2c" "4933407L21Rik"
ENSMUSG00000099767 ENSMUSG00000049608 ENSMUSG00000100108 ENSMUSG00000026226 ENSMUSG00000026227 ENSMUSG00000026229 ENSMUSG00000026228 ENSMUSG00000094638
"Gm28884" "Gpr55" "Gm28100" "Spata3" "2810459M11Rik" "Psmd1" "Htr2b" "Gm21972"
ENSMUSG00000062590 ENSMUSG00000087538 ENSMUSG00000079445 ENSMUSG00000099644 ENSMUSG00000026234 ENSMUSG00000026237 ENSMUSG00000036574 ENSMUSG00000026238
"Armc9" "Gm16341" "B3gnt7" "Gm28626" "Ncl" "Nmur1" "1700019O17Rik" "Ptma"
ENSMUSG00000026239 ENSMUSG00000026240 ENSMUSG00000026241 ENSMUSG00000053333 ENSMUSG00000099401 ENSMUSG00000101625 ENSMUSG00000026246 ENSMUSG00000079440
"Pde6d" "Cops7b" "Nppc" "Dis3l2" "Gm28375" "Gm29371" "Alppl2" "Alpi"
ENSMUSG00000036500 ENSMUSG00000099839 ENSMUSG00000026247 ENSMUSG00000036480 ENSMUSG00000026251 ENSMUSG00000026253 ENSMUSG00000026254 ENSMUSG00000026255
"Akp3" "Gm29374" "Ecel1" "Prss56" "Chrnd" "Chrng" "Eif4e2" "Efhd1"
ENSMUSG00000089821 ENSMUSG00000048000 ENSMUSG00000079436 ENSMUSG00000026258 ENSMUSG00000026259 ENSMUSG00000079434 ENSMUSG00000026288 ENSMUSG00000026289
"Efhd1os" "Gigyf2" "Kcnj13" "3110079O15Rik" "Ngef" "Neu2" "Inpp5d" "Atg16l1"
ENSMUSG00000056055 ENSMUSG00000070738 ENSMUSG00000101942 ENSMUSG00000005501 ENSMUSG00000090165 ENSMUSG00000090175 ENSMUSG00000089675 ENSMUSG00000090124
"Sag" "Dgkd" "Gm19582" "Usp40" "Ugt1a10" "Ugt1a9" "Ugt1a8" "Ugt1a7c"
ENSMUSG00000090145 ENSMUSG00000054545 ENSMUSG00000089943 ENSMUSG00000090171 ENSMUSG00000081984 ENSMUSG00000089960 ENSMUSG00000079429 ENSMUSG00000044783
"Ugt1a6b" "Ugt1a6a" "Ugt1a5" "Ugt1a2" "Dnajb3" "Ugt1a1" "Mroh2a" "Hjurp"
ENSMUSG00000036251 ENSMUSG00000085420 ENSMUSG00000026295 ENSMUSG00000099553 ENSMUSG00000100908 ENSMUSG00000062310 ENSMUSG00000100798 ENSMUSG00000100367
"Trpm8" "4930453O03Rik" "Spp2" "Gm29538" "Gm28888" "Glrp1" "Gm19589" "Gm29336"
ENSMUSG00000049866 ENSMUSG00000097398 ENSMUSG00000099848 ENSMUSG00000099378 ENSMUSG00000036206 ENSMUSG00000101288 ENSMUSG00000099938 ENSMUSG00000055013
"Arl4c" "Platr5" "Gm29337" "1700067G17Rik" "Sh3bp4" "Gm28342" "C030007H22Rik" "Agap1"
ENSMUSG00000034486 ENSMUSG00000067081 ENSMUSG00000026301 ENSMUSG00000100850 ENSMUSG00000044337 ENSMUSG00000101951 ENSMUSG00000101028 ENSMUSG00000101997
"Gbx2" "Asb18" "Iqca" "4930434B07Rik" "Ackr3" "Gm28721" "Gm28723" "Gm28722"
ENSMUSG00000034432 ENSMUSG00000056128 ENSMUSG00000048126 ENSMUSG00000026303 ENSMUSG00000090550 ENSMUSG00000026304 ENSMUSG00000100791 ENSMUSG00000026305
"Cops8" "Gm9991" "Col6a3" "Mlph" "Prlh" "Rab17" "Gm28199" "Lrrfip1"
ENSMUSG00000070732 ENSMUSG00000034353 ENSMUSG00000034343 ENSMUSG00000097285 ENSMUSG00000026307 ENSMUSG00000090322 ENSMUSG00000049515 ENSMUSG00000026308
"Rbm44" "Ramp1" "Ube2f" "Gm26683" "Scly" "Gm17090" "Espnl" "Klhl30"
ENSMUSG00000047443 ENSMUSG00000026309 ENSMUSG00000100253 ENSMUSG00000067071 ENSMUSG00000055866 ENSMUSG00000100151 ENSMUSG00000034292 ENSMUSG00000026311
"Fam132b" "Ilkap" "1700020N18Rik" "Hes6" "Per2" "Gm28382" "Traf3ip1" "Asb1"
ENSMUSG00000101705 ENSMUSG00000100980 ENSMUSG00000007805 ENSMUSG00000026313 ENSMUSG00000096941 ENSMUSG00000101265 ENSMUSG00000026260 ENSMUSG00000067064
"Gm28380" "Gm29100" "Twist2" "Hdac4" "Gm26720" "Gm29099" "Ndufa10" "Olfr1416"
ENSMUSG00000057464 ENSMUSG00000042849 ENSMUSG00000097001 ENSMUSG00000058904 ENSMUSG00000100793 ENSMUSG00000046300 ENSMUSG00000062497 ENSMUSG00000063583
"Olfr1415" "Olfr1414" "1700054K02Rik" "Olfr1413" "Gm28479" "Olfr1412" "Olfr1411" "Olfr1410"
ENSMUSG00000061616 ENSMUSG00000073616 ENSMUSG00000044055 ENSMUSG00000100546 ENSMUSG00000099665 ENSMUSG00000100781 ENSMUSG00000034220 ENSMUSG00000101995
"Olfr12" "Myeov2" "Otos" "Gm29483" "Gm29482" "Gm29481" "Gpc1" "Gm29480"
ENSMUSG00000034212 ENSMUSG00000047067 ENSMUSG00000097251 ENSMUSG00000026269 ENSMUSG00000100632 ENSMUSG00000026270 ENSMUSG00000026271 ENSMUSG00000045091
"Ankmy1" "Dusp28" "5033417F24Rik" "Rnpepl1" "9430060I03Rik" "Capn10" "Gpr35" "Aqp12"
ENSMUSG00000014602 ENSMUSG00000101378 ENSMUSG00000026272 ENSMUSG00000034159 ENSMUSG00000084989 ENSMUSG00000047793 ENSMUSG00000026273 ENSMUSG00000101172
"Kif1a" "Gm28086" "Agxt" "2310007B03Rik" "Crocc2" "Sned1" "Mterf4" "Gm28535"
ENSMUSG00000026274 ENSMUSG00000026275 ENSMUSG00000034107 ENSMUSG00000034088 ENSMUSG00000026276 ENSMUSG00000034066 ENSMUSG00000026277 ENSMUSG00000100927
"Pask" "Ppp1r7" "Ano7" "Hdlbp" "Sept2" "Farp2" "Stk25" "Gm28536"
ENSMUSG00000026278 ENSMUSG00000026279 ENSMUSG00000101952 ENSMUSG00000026280 ENSMUSG00000026281 ENSMUSG00000026283 ENSMUSG00000073609 ENSMUSG00000094651
"Bok" "Thap4" "Gm10550" "Atg4b" "Dtymk" "Ing5" "D2hgdh" "Gal3st2"
ENSMUSG00000093805 ENSMUSG00000073608 ENSMUSG00000034000 ENSMUSG00000026285 ENSMUSG00000100518 ENSMUSG00000051185 ENSMUSG00000040710 ENSMUSG00000100777
"Gm9994" "Gm6086" "Neu4" "Pdcd1" "4930440C22Rik" "Fam174a" "St8sia4" "4930598F16Rik"
ENSMUSG00000100062 ENSMUSG00000100336 ENSMUSG00000100589 ENSMUSG00000040693 ENSMUSG00000097814 ENSMUSG00000100454 ENSMUSG00000026331 ENSMUSG00000044768
"1700063A18Rik" "Gm29601" "4930533P14Rik" "Slco4c1" "Panct2" "Gm28901" "Slco6c1" "D1Ertd622e"
ENSMUSG00000040648 ENSMUSG00000026333 ENSMUSG00000026335 ENSMUSG00000100182 ENSMUSG00000100711 ENSMUSG00000026336 ENSMUSG00000100009 ENSMUSG00000067028
"Ppip5k2" "Gin1" "Pam" "1810006J02Rik" "Gm29461" "Slco6d1" "Gm7967" "Cntnap5b"
ENSMUSG00000100684 ENSMUSG00000099375 ENSMUSG00000050840 ENSMUSG00000089866 ENSMUSG00000099669 ENSMUSG00000047496 ENSMUSG00000097482 ENSMUSG00000056536
"Gm20268" "Gm28187" "Cdh20" "Gm15699" "Gm29012" "Rnf152" "Gm17634" "Pign"
ENSMUSG00000026319 ENSMUSG00000026321 ENSMUSG00000099843 ENSMUSG00000038866 ENSMUSG00000101583 ENSMUSG00000044340 ENSMUSG00000100247 ENSMUSG00000057329
"2310035C23Rik" "Tnfrsf11a" "Gm7160" "Zcchc2" "Gm20753" "Phlpp1" "A530053M12Rik" "Bcl2"
ENSMUSG00000054006 ENSMUSG00000009905 ENSMUSG00000009907 ENSMUSG00000067006 ENSMUSG00000059956 ENSMUSG00000048775 ENSMUSG00000044594 ENSMUSG00000058017
"D630008O14Rik" "Kdsr" "Vps4b" "Serpinb5" "Serpinb12" "Serpinb13" "Serpinb3a" "Serpinb3d"
ENSMUSG00000073602 ENSMUSG00000073601 ENSMUSG00000026327 ENSMUSG00000087210 ENSMUSG00000067001 ENSMUSG00000062345 ENSMUSG00000102843 ENSMUSG00000026315
"Serpinb3b" "Serpinb3c" "Serpinb11" "Gm15391" "Serpinb7" "Serpinb2" "Serpinb10" "Serpinb8"
ENSMUSG00000086161 ENSMUSG00000100457 ENSMUSG00000026312 ENSMUSG00000047216 ENSMUSG00000101253 ENSMUSG00000038702 ENSMUSG00000101453 ENSMUSG00000097648
"Gm15389" "D830032E09Rik" "Cdh7" "Cdh19" "Gm29088" "Dsel" "Gm28189" "9330185C12Rik"
ENSMUSG00000070695 ENSMUSG00000094429 ENSMUSG00000107979 ENSMUSG00000100265 ENSMUSG00000101303 ENSMUSG00000100305 ENSMUSG00000101415 ENSMUSG00000100617
"Cntnap5a" "Gm19965" "Zfp813-ps" "Gm28363" "B020011L13Rik" "Gm28360" "Gm28168" "Gm7145"
ENSMUSG00000102030 ENSMUSG00000026374 ENSMUSG00000026377 ENSMUSG00000099936 ENSMUSG00000064302 ENSMUSG00000107722 ENSMUSG00000026380 ENSMUSG00000048402
"Gm29106" "Tsn" "Nifk" "Gm28867" "Clasp1" "2900060B14Rik" "Tfcp2l1" "Gli2"
ENSMUSG00000097408 ENSMUSG00000099860 ENSMUSG00000101179 ENSMUSG00000037035 ENSMUSG00000004451 ENSMUSG00000098447 ENSMUSG00000098923 ENSMUSG00000101731
"Gm26831" "Gm29456" "Gm29455" "Inhbb" "Ralb" "Gm27184" "Tmem185b" "3830432H09Rik"
ENSMUSG00000026383 ENSMUSG00000026384 ENSMUSG00000101224 ENSMUSG00000036975 ENSMUSG00000036962 ENSMUSG00000026387 ENSMUSG00000050777 ENSMUSG00000026385
"Epb41l5" "Ptpn4" "Gm28209" "Tmem177" "Cfap221" "Sctr" "Tmem37" "Dbi"
ENSMUSG00000026388 ENSMUSG00000026389 ENSMUSG00000036907 ENSMUSG00000101275 ENSMUSG00000026390 ENSMUSG00000058665 ENSMUSG00000099957 ENSMUSG00000101386
"3110009E18Rik" "Steap3" "C1ql2" "1700012E03Rik" "Marco" "En1" "2610027F03Rik" "Gm29346"
ENSMUSG00000101922 ENSMUSG00000099336 ENSMUSG00000100979 ENSMUSG00000097881 ENSMUSG00000101700 ENSMUSG00000003721 ENSMUSG00000101791 ENSMUSG00000026339
"Gm29345" "Gm29348" "Gm29347" "Celrr" "Gm29359" "Insig2" "2210011K15Rik" "Ccdc93"
ENSMUSG00000085857 ENSMUSG00000050534 ENSMUSG00000001674 ENSMUSG00000099960 ENSMUSG00000036815 ENSMUSG00000100851 ENSMUSG00000099574 ENSMUSG00000026341
"Gm15392" "Htr5b" "Ddx18" "Gm28590" "Dpp10" "Gm28928" "1700121L03Rik" "Actr3"
ENSMUSG00000102063 ENSMUSG00000026342 ENSMUSG00000026343 ENSMUSG00000026344 ENSMUSG00000049690 ENSMUSG00000101600 ENSMUSG00000036155 ENSMUSG00000026347
"Gm28706" "Slc35f5" "Gpr39" "Lypd1" "Nckap5" "4930599A14Rik" "Mgat5" "Tmem163"
ENSMUSG00000026348 ENSMUSG00000102014 ENSMUSG00000026349 ENSMUSG00000051590 ENSMUSG00000036104 ENSMUSG00000036086 ENSMUSG00000099760 ENSMUSG00000056211
"Acmsd" "2900009J06Rik" "Ccnt2" "Map3k19" "Rab3gap1" "Zranb3" "Gm28800" "R3hdm1"
ENSMUSG00000026353 ENSMUSG00000026354 ENSMUSG00000026355 ENSMUSG00000026356 ENSMUSG00000045382 ENSMUSG00000097283 ENSMUSG00000042581 ENSMUSG00000086633
"Ubxn4" "Lct" "Mcm6" "Dars" "Cxcr4" "Gm26686" "Thsd7b" "Gm16081"
ENSMUSG00000026401 ENSMUSG00000087691 ENSMUSG00000086825 ENSMUSG00000026399 ENSMUSG00000085526 ENSMUSG00000042554 ENSMUSG00000026405 ENSMUSG00000101904
"Cd55b" "Gm15674" "Gm15675" "Cd55" "Gm16083" "Zp3r" "C4bp" "Gm29427"
ENSMUSG00000026409 ENSMUSG00000046404 ENSMUSG00000042510 ENSMUSG00000099556 ENSMUSG00000100106 ENSMUSG00000026415 ENSMUSG00000086706 ENSMUSG00000026417
"Pfkfb2" "Yod1" "AA986860" "Gm28857" "Gm28856" "Fcamr" "Gm15848" "Pigr"
ENSMUSG00000042474 ENSMUSG00000026420 ENSMUSG00000026416 ENSMUSG00000016524 ENSMUSG00000016529 ENSMUSG00000016528 ENSMUSG00000016526 ENSMUSG00000026427
"Fcmr" "Il24" "Il20" "Il19" "Il10" "Mapkapk2" "Dyrk3" "Eif2d"
ENSMUSG00000026430 ENSMUSG00000042349 ENSMUSG00000102027 ENSMUSG00000102055 ENSMUSG00000026425 ENSMUSG00000055184 ENSMUSG00000026432 ENSMUSG00000004552
"Rassf5" "Ikbke" "Gm28914" "Gm28913" "Srgap2" "Fam72a" "Avpr1b" "Ctse"
ENSMUSG00000052688 ENSMUSG00000042268 ENSMUSG00000042251 ENSMUSG00000013275 ENSMUSG00000026433 ENSMUSG00000026434 ENSMUSG00000026435 ENSMUSG00000026436
"Rab7b" "Slc26a9" "Pm20d1" "Slc41a1" "Rab29" "Nucks1" "Slc45a3" "Elk4"
ENSMUSG00000059149 ENSMUSG00000097454 ENSMUSG00000026437 ENSMUSG00000099874 ENSMUSG00000079330 ENSMUSG00000097540 ENSMUSG00000066936 ENSMUSG00000101549
"Mfsd4" "Gm26892" "Cdk18" "Gm29629" "Lemd1" "1700037F24Rik" "Gm10188" "Gm29630"
[ reached getOption("max.print") -- omitted 26998 entries ]row.names(obj)
[1] "ENSMUSG00000051951" "ENSMUSG00000089699" "ENSMUSG00000102343" "ENSMUSG00000025900" "ENSMUSG00000109048" "ENSMUSG00000025902" "ENSMUSG00000104328"
[8] "ENSMUSG00000033845" "ENSMUSG00000025903" "ENSMUSG00000104217" "ENSMUSG00000033813" "ENSMUSG00000002459" "ENSMUSG00000085623" "ENSMUSG00000033793"
[15] "ENSMUSG00000025905" "ENSMUSG00000033774" "ENSMUSG00000025907" "ENSMUSG00000090031" "ENSMUSG00000087247" "ENSMUSG00000033740" "ENSMUSG00000051285"
[22] "ENSMUSG00000097797" "ENSMUSG00000103067" "ENSMUSG00000025909" "ENSMUSG00000061024" "ENSMUSG00000025911" "ENSMUSG00000067879" "ENSMUSG00000099827"
[29] "ENSMUSG00000025912" "ENSMUSG00000045210" "ENSMUSG00000097893" "ENSMUSG00000025915" "ENSMUSG00000046101" "ENSMUSG00000098234" "ENSMUSG00000099032"
[36] "ENSMUSG00000025916" "ENSMUSG00000087199" "ENSMUSG00000025917" "ENSMUSG00000056763" "ENSMUSG00000067851" "ENSMUSG00000042501" "ENSMUSG00000048960"
[43] "ENSMUSG00000057715" "ENSMUSG00000097171" "ENSMUSG00000101314" "ENSMUSG00000016918" "ENSMUSG00000025938" "ENSMUSG00000099498" "ENSMUSG00000042414"
[50] "ENSMUSG00000005886" "ENSMUSG00000101476" "ENSMUSG00000025935" "ENSMUSG00000025937" "ENSMUSG00000067813" "ENSMUSG00000025932" "ENSMUSG00000054493"
[57] "ENSMUSG00000025930" "ENSMUSG00000032769" "ENSMUSG00000092083" "ENSMUSG00000025925" "ENSMUSG00000032719" "ENSMUSG00000067795" "ENSMUSG00000043716"
[64] "ENSMUSG00000025921" "ENSMUSG00000100868" "ENSMUSG00000025920" "ENSMUSG00000089982" "ENSMUSG00000025939" "ENSMUSG00000079658" "ENSMUSG00000097744"
[71] "ENSMUSG00000025940" "ENSMUSG00000025779" "ENSMUSG00000101640" "ENSMUSG00000042686" "ENSMUSG00000100110" "ENSMUSG00000025777" "ENSMUSG00000099899"
[78] "ENSMUSG00000067780" "ENSMUSG00000100053" "ENSMUSG00000085125" "ENSMUSG00000025776" "ENSMUSG00000099895" "ENSMUSG00000025774" "ENSMUSG00000073735"
[85] "ENSMUSG00000067773" "ENSMUSG00000101738" "ENSMUSG00000089787" "ENSMUSG00000042596" "ENSMUSG00000025927" "ENSMUSG00000100538" "ENSMUSG00000043760"
[92] "ENSMUSG00000089914" "ENSMUSG00000099906" "ENSMUSG00000025929" "ENSMUSG00000041872" "ENSMUSG00000041859" "ENSMUSG00000102121" "ENSMUSG00000097934"
[99] "ENSMUSG00000025931" "ENSMUSG00000041809" "ENSMUSG00000041779" "ENSMUSG00000099971" "ENSMUSG00000025933" "ENSMUSG00000025934" "ENSMUSG00000099343"
[106] "ENSMUSG00000067750" "ENSMUSG00000041722" "ENSMUSG00000085079" "ENSMUSG00000028033" "ENSMUSG00000097109" "ENSMUSG00000041670" "ENSMUSG00000073730"
[113] "ENSMUSG00000097970" "ENSMUSG00000100775" "ENSMUSG00000026158" "ENSMUSG00000099503" "ENSMUSG00000026156" "ENSMUSG00000026155" "ENSMUSG00000026154"
[120] "ENSMUSG00000026153" "ENSMUSG00000026147" "ENSMUSG00000026141" "ENSMUSG00000073725" "ENSMUSG00000100483" "ENSMUSG00000099392" "ENSMUSG00000033569"
[127] "ENSMUSG00000073722" "ENSMUSG00000101514" "ENSMUSG00000048411" "ENSMUSG00000053185" "ENSMUSG00000048874" "ENSMUSG00000026064" "ENSMUSG00000100371"
[134] "ENSMUSG00000100237" "ENSMUSG00000086727" "ENSMUSG00000100910" "ENSMUSG00000050217" "ENSMUSG00000026063" "ENSMUSG00000026058" "ENSMUSG00000091318"
[141] "ENSMUSG00000102917" "ENSMUSG00000104230" "ENSMUSG00000026134" "ENSMUSG00000004768" "ENSMUSG00000042215" "ENSMUSG00000042197" "ENSMUSG00000042182"
[148] "ENSMUSG00000026131" "ENSMUSG00000104397" "ENSMUSG00000102336" "ENSMUSG00000042111" "ENSMUSG00000101711" "ENSMUSG00000026127" "ENSMUSG00000026126"
[155] "ENSMUSG00000101223" "ENSMUSG00000026125" "ENSMUSG00000026124" "ENSMUSG00000037529" "ENSMUSG00000045815" "ENSMUSG00000045174" "ENSMUSG00000037509"
[162] "ENSMUSG00000104002" "ENSMUSG00000037503" "ENSMUSG00000026123" "ENSMUSG00000104417" "ENSMUSG00000101714" "ENSMUSG00000102531" "ENSMUSG00000102279"
[169] "ENSMUSG00000103708" "ENSMUSG00000104201" "ENSMUSG00000045216" "ENSMUSG00000104523" "ENSMUSG00000102202" "ENSMUSG00000037470" "ENSMUSG00000047180"
[176] "ENSMUSG00000037447" "ENSMUSG00000102762" "ENSMUSG00000010453" "ENSMUSG00000037432" "ENSMUSG00000001143" "ENSMUSG00000037408" "ENSMUSG00000001138"
[183] "ENSMUSG00000102845" "ENSMUSG00000067653" "ENSMUSG00000109510" "ENSMUSG00000079610" "ENSMUSG00000026121" "ENSMUSG00000046337" "ENSMUSG00000061518"
[190] "ENSMUSG00000037351" "ENSMUSG00000102416" "ENSMUSG00000104237" "ENSMUSG00000026117" "ENSMUSG00000026116" "ENSMUSG00000050122" "ENSMUSG00000103603"
[197] "ENSMUSG00000026114" "ENSMUSG00000026113" "ENSMUSG00000086064" "ENSMUSG00000026112" "ENSMUSG00000026111" "ENSMUSG00000026110" "ENSMUSG00000026090"
[204] "ENSMUSG00000089767" "ENSMUSG00000060771" "ENSMUSG00000097268" "ENSMUSG00000037216" "ENSMUSG00000026088" "ENSMUSG00000026087" "ENSMUSG00000061584"
[211] "ENSMUSG00000087374" "ENSMUSG00000026085" "ENSMUSG00000058407" "ENSMUSG00000026083" "ENSMUSG00000026082" "ENSMUSG00000102716" "ENSMUSG00000037138"
[218] "ENSMUSG00000085391" "ENSMUSG00000085280" "ENSMUSG00000087131" "ENSMUSG00000048814" "ENSMUSG00000026080" "ENSMUSG00000103647" "ENSMUSG00000067604"
[225] "ENSMUSG00000026078" "ENSMUSG00000104188" "ENSMUSG00000026077" "ENSMUSG00000073702" "ENSMUSG00000003134" "ENSMUSG00000003135" "ENSMUSG00000048234"
[232] "ENSMUSG00000050967" "ENSMUSG00000097083" "ENSMUSG00000057173" "ENSMUSG00000091937" "ENSMUSG00000101634" "ENSMUSG00000026074" "ENSMUSG00000026073"
[239] "ENSMUSG00000097899" "ENSMUSG00000026072" "ENSMUSG00000070942" "ENSMUSG00000026069" "ENSMUSG00000026070" "ENSMUSG00000026068" "ENSMUSG00000104441"
[246] "ENSMUSG00000026065" "ENSMUSG00000026062" "ENSMUSG00000103679" "ENSMUSG00000103270" "ENSMUSG00000041945" "ENSMUSG00000079588" "ENSMUSG00000104072"
[253] "ENSMUSG00000100185" "ENSMUSG00000100832" "ENSMUSG00000053640" "ENSMUSG00000101919" "ENSMUSG00000101299" "ENSMUSG00000100180" "ENSMUSG00000060424"
[260] "ENSMUSG00000045515" "ENSMUSG00000099784" "ENSMUSG00000060679" "ENSMUSG00000041907" "ENSMUSG00000070939" "ENSMUSG00000100269" "ENSMUSG00000041878"
[267] "ENSMUSG00000010290" "ENSMUSG00000008136" "ENSMUSG00000099576" "ENSMUSG00000066877" "ENSMUSG00000026051" "ENSMUSG00000100764" "ENSMUSG00000100635"
[274] "ENSMUSG00000100480" "ENSMUSG00000057363" "ENSMUSG00000041763" "ENSMUSG00000047343" "ENSMUSG00000091844" "ENSMUSG00000026049" "ENSMUSG00000026047"
[281] "ENSMUSG00000041684" "ENSMUSG00000026048" "ENSMUSG00000046828" "ENSMUSG00000056870" "ENSMUSG00000101701" "ENSMUSG00000026043" "ENSMUSG00000026042"
[288] "ENSMUSG00000025995" "ENSMUSG00000098549" "ENSMUSG00000025993" "ENSMUSG00000041144" "ENSMUSG00000101337" "ENSMUSG00000025986" "ENSMUSG00000100213"
[295] "ENSMUSG00000101447" "ENSMUSG00000051616" "ENSMUSG00000099608" "ENSMUSG00000100451" "ENSMUSG00000100816" "ENSMUSG00000026109" "ENSMUSG00000100671"
[302] "ENSMUSG00000101242" "ENSMUSG00000099625" "ENSMUSG00000101799" "ENSMUSG00000045954" "ENSMUSG00000101702" "ENSMUSG00000026107" "ENSMUSG00000099413"
[309] "ENSMUSG00000101741" "ENSMUSG00000018417" "ENSMUSG00000062939" "ENSMUSG00000026104" "ENSMUSG00000026103" "ENSMUSG00000002881" "ENSMUSG00000100120"
[316] "ENSMUSG00000099878" "ENSMUSG00000043015" "ENSMUSG00000041439" "ENSMUSG00000026102" "ENSMUSG00000041426" "ENSMUSG00000043629" "ENSMUSG00000026100"
[323] "ENSMUSG00000060715" "ENSMUSG00000026098" "ENSMUSG00000100763" "ENSMUSG00000026097" "ENSMUSG00000100679" "ENSMUSG00000026096" "ENSMUSG00000099913"
[330] "ENSMUSG00000026095" "ENSMUSG00000096141" "ENSMUSG00000026094" "ENSMUSG00000042807" "ENSMUSG00000025983" "ENSMUSG00000041303" "ENSMUSG00000073678"
[337] "ENSMUSG00000052331" "ENSMUSG00000101674" "ENSMUSG00000025982" "ENSMUSG00000025981" "ENSMUSG00000025980" "ENSMUSG00000073676" "ENSMUSG00000025979"
[344] "ENSMUSG00000025978" "ENSMUSG00000097649" "ENSMUSG00000046994" "ENSMUSG00000025977" "ENSMUSG00000038349" "ENSMUSG00000099950" "ENSMUSG00000100372"
[351] "ENSMUSG00000101332" "ENSMUSG00000045336" "ENSMUSG00000038331" "ENSMUSG00000099945" "ENSMUSG00000101429" "ENSMUSG00000097519" "ENSMUSG00000038323"
[358] "ENSMUSG00000048495" "ENSMUSG00000025971" "ENSMUSG00000038305" "ENSMUSG00000091283" "ENSMUSG00000054770" "ENSMUSG00000026039" "ENSMUSG00000063558"
[365] "ENSMUSG00000064294" "ENSMUSG00000038242" "ENSMUSG00000089822" "ENSMUSG00000079554" "ENSMUSG00000051223" "ENSMUSG00000026034" "ENSMUSG00000026035"
[372] "ENSMUSG00000026036" "ENSMUSG00000026037" "ENSMUSG00000085054" "ENSMUSG00000038174" "ENSMUSG00000026032" "ENSMUSG00000047528" "ENSMUSG00000026031"
[379] "ENSMUSG00000026029" "ENSMUSG00000026028" "ENSMUSG00000026027" "ENSMUSG00000099752" "ENSMUSG00000072295" "ENSMUSG00000038079" "ENSMUSG00000097573"
[386] "ENSMUSG00000079550" "ENSMUSG00000101586" "ENSMUSG00000026024" "ENSMUSG00000026023" "ENSMUSG00000099922" "ENSMUSG00000041075" "ENSMUSG00000097819"
[393] "ENSMUSG00000047361" "ENSMUSG00000099811" "ENSMUSG00000101409" "ENSMUSG00000026021" "ENSMUSG00000026020" "ENSMUSG00000067336" "ENSMUSG00000041040"
[400] "ENSMUSG00000026018" "ENSMUSG00000026019" "ENSMUSG00000026017" "ENSMUSG00000073664" "ENSMUSG00000049439" "ENSMUSG00000026782" "ENSMUSG00000026014"
[407] "ENSMUSG00000026012" "ENSMUSG00000086795" "ENSMUSG00000085965" "ENSMUSG00000026011" "ENSMUSG00000026009" "ENSMUSG00000100893" "ENSMUSG00000085248"
[414] "ENSMUSG00000085447" "ENSMUSG00000086408" "ENSMUSG00000100965" "ENSMUSG00000086009" "ENSMUSG00000052062" "ENSMUSG00000085842" "ENSMUSG00000085019"
[421] "ENSMUSG00000085400" "ENSMUSG00000100750" "ENSMUSG00000025969" "ENSMUSG00000100811" "ENSMUSG00000100426" "ENSMUSG00000040865" "ENSMUSG00000084799"
[428] "ENSMUSG00000101599" "ENSMUSG00000025968" "ENSMUSG00000025967" "ENSMUSG00000046856" "ENSMUSG00000087561" "ENSMUSG00000027520" "ENSMUSG00000025964"
[435] "ENSMUSG00000069085" "ENSMUSG00000025963" "ENSMUSG00000025962" "ENSMUSG00000025961" "ENSMUSG00000044689" "ENSMUSG00000025959" "ENSMUSG00000097272"
[442] "ENSMUSG00000086836" "ENSMUSG00000101895" "ENSMUSG00000025958" "ENSMUSG00000025956" "ENSMUSG00000101832" "ENSMUSG00000100437" "ENSMUSG00000070871"
[449] "ENSMUSG00000045005" "ENSMUSG00000051344" "ENSMUSG00000025955" "ENSMUSG00000070870" "ENSMUSG00000067299" "ENSMUSG00000025952" "ENSMUSG00000073658"
[456] "ENSMUSG00000044429" "ENSMUSG00000100846" "ENSMUSG00000044816" "ENSMUSG00000025950" "ENSMUSG00000025949" "ENSMUSG00000025946" "ENSMUSG00000025945"
[463] "ENSMUSG00000015222" "ENSMUSG00000073656" "ENSMUSG00000055567" "ENSMUSG00000026005" "ENSMUSG00000026004" "ENSMUSG00000026003" "ENSMUSG00000061816"
[470] "ENSMUSG00000026000" "ENSMUSG00000025991" "ENSMUSG00000086204" "ENSMUSG00000085075" "ENSMUSG00000087329" "ENSMUSG00000062209" "ENSMUSG00000099804"
[477] "ENSMUSG00000100354" "ENSMUSG00000101156" "ENSMUSG00000025997" "ENSMUSG00000053153" "ENSMUSG00000045648" "ENSMUSG00000026196" "ENSMUSG00000050296"
[484] "ENSMUSG00000026192" "ENSMUSG00000026193" "ENSMUSG00000073652" "ENSMUSG00000099707" "ENSMUSG00000101211" "ENSMUSG00000101848" "ENSMUSG00000101764"
[491] "ENSMUSG00000102123" "ENSMUSG00000039395" "ENSMUSG00000097131" "ENSMUSG00000026189" "ENSMUSG00000026188" "ENSMUSG00000026187" "ENSMUSG00000039372"
[498] "ENSMUSG00000039354" "ENSMUSG00000039342" "ENSMUSG00000046330" "ENSMUSG00000039323" "ENSMUSG00000026185" "ENSMUSG00000101968" "ENSMUSG00000026182"
[505] "ENSMUSG00000101112" "ENSMUSG00000099877" "ENSMUSG00000101812" "ENSMUSG00000100444" "ENSMUSG00000100429" "ENSMUSG00000100301" "ENSMUSG00000101344"
[512] "ENSMUSG00000055322" "ENSMUSG00000061815" "ENSMUSG00000026180" "ENSMUSG00000048480" "ENSMUSG00000006304" "ENSMUSG00000064272" "ENSMUSG00000006299"
[519] "ENSMUSG00000101503" "ENSMUSG00000026179" "ENSMUSG00000006301" "ENSMUSG00000073650" "ENSMUSG00000026177" "ENSMUSG00000026176" "ENSMUSG00000026175"
[526] "ENSMUSG00000033364" "ENSMUSG00000026174" "ENSMUSG00000026173" "ENSMUSG00000026135" "ENSMUSG00000026172" "ENSMUSG00000026171" "ENSMUSG00000033276"
[533] "ENSMUSG00000033257" "ENSMUSG00000026170" "ENSMUSG00000006542" "ENSMUSG00000033227" "ENSMUSG00000099472" "ENSMUSG00000026167" "ENSMUSG00000090071"
[540] "ENSMUSG00000055197" "ENSMUSG00000006546" "ENSMUSG00000047021" "ENSMUSG00000089653" "ENSMUSG00000006538" "ENSMUSG00000026162" "ENSMUSG00000026205"
[547] "ENSMUSG00000033159" "ENSMUSG00000049339" "ENSMUSG00000026197" "ENSMUSG00000026198" "ENSMUSG00000033124" "ENSMUSG00000026199" "ENSMUSG00000026200"
[554] "ENSMUSG00000026201" "ENSMUSG00000026202" "ENSMUSG00000096094" "ENSMUSG00000026203" "ENSMUSG00000026204" "ENSMUSG00000101840" "ENSMUSG00000033061"
[561] "ENSMUSG00000100556" "ENSMUSG00000026209" "ENSMUSG00000026208" "ENSMUSG00000085653" "ENSMUSG00000026207" "ENSMUSG00000086053" "ENSMUSG00000033021"
[568] "ENSMUSG00000033007" "ENSMUSG00000032997" "ENSMUSG00000026211" "ENSMUSG00000051703" "ENSMUSG00000032968" "ENSMUSG00000026213" "ENSMUSG00000006576"
[575] "ENSMUSG00000099996" "ENSMUSG00000100827" "ENSMUSG00000100553" "ENSMUSG00000100534" "ENSMUSG00000026235" "ENSMUSG00000101849" "ENSMUSG00000102052"
[582] "ENSMUSG00000004872" "ENSMUSG00000032908" "ENSMUSG00000099561" "ENSMUSG00000026245" "ENSMUSG00000090486" "ENSMUSG00000012187" "ENSMUSG00000099364"
[589] "ENSMUSG00000100562" "ENSMUSG00000032883" "ENSMUSG00000079470" "ENSMUSG00000099706" "ENSMUSG00000047330" "ENSMUSG00000101324" "ENSMUSG00000050711"
[596] "ENSMUSG00000054702" "ENSMUSG00000073643" "ENSMUSG00000026248" "ENSMUSG00000026249" "ENSMUSG00000099552" "ENSMUSG00000043230" "ENSMUSG00000101257"
[603] "ENSMUSG00000004364" "ENSMUSG00000101722" "ENSMUSG00000101483" "ENSMUSG00000038608" "ENSMUSG00000054976" "ENSMUSG00000055980" "ENSMUSG00000022591"
[610] "ENSMUSG00000026142" "ENSMUSG00000100786" "ENSMUSG00000067158" "ENSMUSG00000079465" "ENSMUSG00000026150" "ENSMUSG00000026149" "ENSMUSG00000100170"
[617] "ENSMUSG00000026159" "ENSMUSG00000038496" "ENSMUSG00000100190" "ENSMUSG00000101315" "ENSMUSG00000026166" "ENSMUSG00000053161" "ENSMUSG00000026163"
[624] "ENSMUSG00000100580" "ENSMUSG00000045658" "ENSMUSG00000036766" "ENSMUSG00000026219" "ENSMUSG00000073633" "ENSMUSG00000026220" "ENSMUSG00000052477"
[631] "ENSMUSG00000089844" "ENSMUSG00000073631" "ENSMUSG00000072109" "ENSMUSG00000090252" "ENSMUSG00000089652" "ENSMUSG00000089714" "ENSMUSG00000094127"
[638] "ENSMUSG00000070034" "ENSMUSG00000090103" "ENSMUSG00000070031" "ENSMUSG00000073628" "ENSMUSG00000090246" "ENSMUSG00000026222" "ENSMUSG00000052760"
[645] "ENSMUSG00000100217" "ENSMUSG00000036707" "ENSMUSG00000026223" "ENSMUSG00000026224" "ENSMUSG00000099767" "ENSMUSG00000049608" "ENSMUSG00000100108"
[652] "ENSMUSG00000026226" "ENSMUSG00000026227" "ENSMUSG00000026229" "ENSMUSG00000026228" "ENSMUSG00000094638" "ENSMUSG00000062590" "ENSMUSG00000087538"
[659] "ENSMUSG00000079445" "ENSMUSG00000099644" "ENSMUSG00000026234" "ENSMUSG00000026237" "ENSMUSG00000036574" "ENSMUSG00000026238" "ENSMUSG00000026239"
[666] "ENSMUSG00000026240" "ENSMUSG00000026241" "ENSMUSG00000053333" "ENSMUSG00000099401" "ENSMUSG00000101625" "ENSMUSG00000026246" "ENSMUSG00000079440"
[673] "ENSMUSG00000036500" "ENSMUSG00000099839" "ENSMUSG00000026247" "ENSMUSG00000036480" "ENSMUSG00000026251" "ENSMUSG00000026253" "ENSMUSG00000026254"
[680] "ENSMUSG00000026255" "ENSMUSG00000089821" "ENSMUSG00000048000" "ENSMUSG00000079436" "ENSMUSG00000026258" "ENSMUSG00000026259" "ENSMUSG00000079434"
[687] "ENSMUSG00000026288" "ENSMUSG00000026289" "ENSMUSG00000056055" "ENSMUSG00000070738" "ENSMUSG00000101942" "ENSMUSG00000005501" "ENSMUSG00000090165"
[694] "ENSMUSG00000090175" "ENSMUSG00000089675" "ENSMUSG00000090124" "ENSMUSG00000090145" "ENSMUSG00000054545" "ENSMUSG00000089943" "ENSMUSG00000090171"
[701] "ENSMUSG00000081984" "ENSMUSG00000089960" "ENSMUSG00000079429" "ENSMUSG00000044783" "ENSMUSG00000036251" "ENSMUSG00000085420" "ENSMUSG00000026295"
[708] "ENSMUSG00000099553" "ENSMUSG00000100908" "ENSMUSG00000062310" "ENSMUSG00000100798" "ENSMUSG00000100367" "ENSMUSG00000049866" "ENSMUSG00000097398"
[715] "ENSMUSG00000099848" "ENSMUSG00000099378" "ENSMUSG00000036206" "ENSMUSG00000101288" "ENSMUSG00000099938" "ENSMUSG00000055013" "ENSMUSG00000034486"
[722] "ENSMUSG00000067081" "ENSMUSG00000026301" "ENSMUSG00000100850" "ENSMUSG00000044337" "ENSMUSG00000101951" "ENSMUSG00000101028" "ENSMUSG00000101997"
[729] "ENSMUSG00000034432" "ENSMUSG00000056128" "ENSMUSG00000048126" "ENSMUSG00000026303" "ENSMUSG00000090550" "ENSMUSG00000026304" "ENSMUSG00000100791"
[736] "ENSMUSG00000026305" "ENSMUSG00000070732" "ENSMUSG00000034353" "ENSMUSG00000034343" "ENSMUSG00000097285" "ENSMUSG00000026307" "ENSMUSG00000090322"
[743] "ENSMUSG00000049515" "ENSMUSG00000026308" "ENSMUSG00000047443" "ENSMUSG00000026309" "ENSMUSG00000100253" "ENSMUSG00000067071" "ENSMUSG00000055866"
[750] "ENSMUSG00000100151" "ENSMUSG00000034292" "ENSMUSG00000026311" "ENSMUSG00000101705" "ENSMUSG00000100980" "ENSMUSG00000007805" "ENSMUSG00000026313"
[757] "ENSMUSG00000096941" "ENSMUSG00000101265" "ENSMUSG00000026260" "ENSMUSG00000067064" "ENSMUSG00000057464" "ENSMUSG00000042849" "ENSMUSG00000097001"
[764] "ENSMUSG00000058904" "ENSMUSG00000100793" "ENSMUSG00000046300" "ENSMUSG00000062497" "ENSMUSG00000063583" "ENSMUSG00000061616" "ENSMUSG00000073616"
[771] "ENSMUSG00000044055" "ENSMUSG00000100546" "ENSMUSG00000099665" "ENSMUSG00000100781" "ENSMUSG00000034220" "ENSMUSG00000101995" "ENSMUSG00000034212"
[778] "ENSMUSG00000047067" "ENSMUSG00000097251" "ENSMUSG00000026269" "ENSMUSG00000100632" "ENSMUSG00000026270" "ENSMUSG00000026271" "ENSMUSG00000045091"
[785] "ENSMUSG00000014602" "ENSMUSG00000101378" "ENSMUSG00000026272" "ENSMUSG00000034159" "ENSMUSG00000084989" "ENSMUSG00000047793" "ENSMUSG00000026273"
[792] "ENSMUSG00000101172" "ENSMUSG00000026274" "ENSMUSG00000026275" "ENSMUSG00000034107" "ENSMUSG00000034088" "ENSMUSG00000026276" "ENSMUSG00000034066"
[799] "ENSMUSG00000026277" "ENSMUSG00000100927" "ENSMUSG00000026278" "ENSMUSG00000026279" "ENSMUSG00000101952" "ENSMUSG00000026280" "ENSMUSG00000026281"
[806] "ENSMUSG00000026283" "ENSMUSG00000073609" "ENSMUSG00000094651" "ENSMUSG00000093805" "ENSMUSG00000073608" "ENSMUSG00000034000" "ENSMUSG00000026285"
[813] "ENSMUSG00000100518" "ENSMUSG00000051185" "ENSMUSG00000040710" "ENSMUSG00000100777" "ENSMUSG00000100062" "ENSMUSG00000100336" "ENSMUSG00000100589"
[820] "ENSMUSG00000040693" "ENSMUSG00000097814" "ENSMUSG00000100454" "ENSMUSG00000026331" "ENSMUSG00000044768" "ENSMUSG00000040648" "ENSMUSG00000026333"
[827] "ENSMUSG00000026335" "ENSMUSG00000100182" "ENSMUSG00000100711" "ENSMUSG00000026336" "ENSMUSG00000100009" "ENSMUSG00000067028" "ENSMUSG00000100684"
[834] "ENSMUSG00000099375" "ENSMUSG00000050840" "ENSMUSG00000089866" "ENSMUSG00000099669" "ENSMUSG00000047496" "ENSMUSG00000097482" "ENSMUSG00000056536"
[841] "ENSMUSG00000026319" "ENSMUSG00000026321" "ENSMUSG00000099843" "ENSMUSG00000038866" "ENSMUSG00000101583" "ENSMUSG00000044340" "ENSMUSG00000100247"
[848] "ENSMUSG00000057329" "ENSMUSG00000054006" "ENSMUSG00000009905" "ENSMUSG00000009907" "ENSMUSG00000067006" "ENSMUSG00000059956" "ENSMUSG00000048775"
[855] "ENSMUSG00000044594" "ENSMUSG00000058017" "ENSMUSG00000073602" "ENSMUSG00000073601" "ENSMUSG00000026327" "ENSMUSG00000087210" "ENSMUSG00000067001"
[862] "ENSMUSG00000062345" "ENSMUSG00000102843" "ENSMUSG00000026315" "ENSMUSG00000086161" "ENSMUSG00000100457" "ENSMUSG00000026312" "ENSMUSG00000047216"
[869] "ENSMUSG00000101253" "ENSMUSG00000038702" "ENSMUSG00000101453" "ENSMUSG00000097648" "ENSMUSG00000070695" "ENSMUSG00000094429" "ENSMUSG00000107979"
[876] "ENSMUSG00000100265" "ENSMUSG00000101303" "ENSMUSG00000100305" "ENSMUSG00000101415" "ENSMUSG00000100617" "ENSMUSG00000102030" "ENSMUSG00000026374"
[883] "ENSMUSG00000026377" "ENSMUSG00000099936" "ENSMUSG00000064302" "ENSMUSG00000107722" "ENSMUSG00000026380" "ENSMUSG00000048402" "ENSMUSG00000097408"
[890] "ENSMUSG00000099860" "ENSMUSG00000101179" "ENSMUSG00000037035" "ENSMUSG00000004451" "ENSMUSG00000098447" "ENSMUSG00000098923" "ENSMUSG00000101731"
[897] "ENSMUSG00000026383" "ENSMUSG00000026384" "ENSMUSG00000101224" "ENSMUSG00000036975" "ENSMUSG00000036962" "ENSMUSG00000026387" "ENSMUSG00000050777"
[904] "ENSMUSG00000026385" "ENSMUSG00000026388" "ENSMUSG00000026389" "ENSMUSG00000036907" "ENSMUSG00000101275" "ENSMUSG00000026390" "ENSMUSG00000058665"
[911] "ENSMUSG00000099957" "ENSMUSG00000101386" "ENSMUSG00000101922" "ENSMUSG00000099336" "ENSMUSG00000100979" "ENSMUSG00000097881" "ENSMUSG00000101700"
[918] "ENSMUSG00000003721" "ENSMUSG00000101791" "ENSMUSG00000026339" "ENSMUSG00000085857" "ENSMUSG00000050534" "ENSMUSG00000001674" "ENSMUSG00000099960"
[925] "ENSMUSG00000036815" "ENSMUSG00000100851" "ENSMUSG00000099574" "ENSMUSG00000026341" "ENSMUSG00000102063" "ENSMUSG00000026342" "ENSMUSG00000026343"
[932] "ENSMUSG00000026344" "ENSMUSG00000049690" "ENSMUSG00000101600" "ENSMUSG00000036155" "ENSMUSG00000026347" "ENSMUSG00000026348" "ENSMUSG00000102014"
[939] "ENSMUSG00000026349" "ENSMUSG00000051590" "ENSMUSG00000036104" "ENSMUSG00000036086" "ENSMUSG00000099760" "ENSMUSG00000056211" "ENSMUSG00000026353"
[946] "ENSMUSG00000026354" "ENSMUSG00000026355" "ENSMUSG00000026356" "ENSMUSG00000045382" "ENSMUSG00000097283" "ENSMUSG00000042581" "ENSMUSG00000086633"
[953] "ENSMUSG00000026401" "ENSMUSG00000087691" "ENSMUSG00000086825" "ENSMUSG00000026399" "ENSMUSG00000085526" "ENSMUSG00000042554" "ENSMUSG00000026405"
[960] "ENSMUSG00000101904" "ENSMUSG00000026409" "ENSMUSG00000046404" "ENSMUSG00000042510" "ENSMUSG00000099556" "ENSMUSG00000100106" "ENSMUSG00000026415"
[967] "ENSMUSG00000086706" "ENSMUSG00000026417" "ENSMUSG00000042474" "ENSMUSG00000026420" "ENSMUSG00000026416" "ENSMUSG00000016524" "ENSMUSG00000016529"
[974] "ENSMUSG00000016528" "ENSMUSG00000016526" "ENSMUSG00000026427" "ENSMUSG00000026430" "ENSMUSG00000042349" "ENSMUSG00000102027" "ENSMUSG00000102055"
[981] "ENSMUSG00000026425" "ENSMUSG00000055184" "ENSMUSG00000026432" "ENSMUSG00000004552" "ENSMUSG00000052688" "ENSMUSG00000042268" "ENSMUSG00000042251"
[988] "ENSMUSG00000013275" "ENSMUSG00000026433" "ENSMUSG00000026434" "ENSMUSG00000026435" "ENSMUSG00000026436" "ENSMUSG00000059149" "ENSMUSG00000097454"
[995] "ENSMUSG00000026437" "ENSMUSG00000099874" "ENSMUSG00000079330" "ENSMUSG00000097540" "ENSMUSG00000066936" "ENSMUSG00000101549"
[ reached getOption("max.print") -- omitted 26998 entries ]obj@reductions$umap <- obj@reductions$umap2set.seed(2023)
cds <- as.cell_data_set(obj[, sample(colnames(obj), size = 10000, replace=F)])Warning: Monocle 3 trajectories require cluster partitions, which Seurat does not calculate. Please run 'cluster_cells' on your cell_data_set objectcds <- cluster_cells(cds, resolution=1e-3)p1 <- plot_cells(cds, reduction_method="UMAP", color_cells_by = "celltype", show_trajectory_graph = FALSE)
p1
cds <- learn_graph(cds, use_partition = FALSE, verbose = TRUE)nn_control:
method: NA
metric: NA
set_nn_control: call stack: learn_graph() => set_nn_control()
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: 2500
cores: 1
grain_size: 1
Processing partition component 1
Current partition is 1
Using 900 nodes for principal graph
Finding kNN with 25 neighbors
set_nn_control: call stack: learn_graph() => multi_component_RGE() => search_nn_matrix() => set_nn_control()
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: 2500
cores: 1
grain_size: 1
search_nn_matrix:
k: 25
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: 2500
cores: 1
grain_size: 1
set_nn_control: call stack: learn_graph() => multi_component_RGE() => search_nn_matrix() => make_nn_index() => set_nn_control()
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: NA
cores: NA
grain_size: NA
make_nn_index:
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: NA
cores: NA
grain_size: NA
make_nn_index: build time 0.99 seconds.
set_nn_control: call stack: learn_graph() => multi_component_RGE() => search_nn_matrix() => search_nn_index() => set_nn_control()
nn_control:
method: annoy
metric: euclidean
n_trees: NA
search_k: 2500
cores: 1
grain_size: 1
search_nn_index:
k: 25
nn_control:
method: annoy
metric: euclidean
n_trees: NA
search_k: 2500
cores: 1
grain_size: 1
search_nn_index: search time: 2.98 seconds.
search_nn_index: search time: 2.98 seconds.
count_nn_missing_self_index:
0 out of 10000 rows are missing the row index
'recall': 100%
Calculating the local density for each sample based on kNNs ...
iter = 1 obj = 522.570000891654
iter = 2 obj = 439.699090913958
iter = 3 obj = 429.761963676286
iter = 4 obj = 424.734200421683
iter = 5 obj = 422.437922976945
iter = 6 obj = 421.233641853213
iter = 7 obj = 420.487716148979
iter = 8 obj = 419.44726440278
iter = 9 obj = 418.388752336581
iter = 10 obj = 418.03427173675
eps = 0.000847251743389105 reach maxiter.
Run kNN based graph clustering starts:
-Input data of 10000 rows and 2 columns
-k is set to 25
Finding nearest neighbors...
set_nn_control: call stack: learn_graph() => multi_component_RGE() => connect_tips() => louvain_clustering() => cluster_cells_make_graph() => make_nn_index() => set_nn_control()
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: NA
cores: NA
grain_size: NA
make_nn_index:
nn_control:
method: annoy
metric: euclidean
n_trees: 50
search_k: NA
cores: NA
grain_size: NA
make_nn_index: build time 0.98 seconds.
set_nn_control: call stack: learn_graph() => multi_component_RGE() => connect_tips() => louvain_clustering() => cluster_cells_make_graph() => search_nn_index() => set_nn_control()
nn_control:
method: annoy
metric: euclidean
n_trees: NA
search_k: 2500
cores: 1
grain_size: 1
search_nn_index:
k: 26
nn_control:
method: annoy
metric: euclidean
n_trees: NA
search_k: 2500
cores: 1
grain_size: 1
search_nn_index: search time: 2.85 seconds.
count_nn_missing_self_index:
0 out of 10000 rows are missing the row index
'recall': 100%
Compute jaccard coefficient between nearest-neighbor sets ...
DONE. Run time:0.0100000000093132s
Build undirected graph from the weighted links ...
DONE ~0.0500000000174623s
Run louvain clustering ...Running louvain iteration 1 ...Maximal modularity is 0.915495950328; corresponding resolution is No resolution
Run kNN based graph clustering DONE, totally takes 0.450162887573242 s. -Number of clusters: 29
|
| | 0%
|
|================================================================================================================================================| 100%Running graph pruning ...
Projecting cells to principal points for partition: 1plot_cells(cds,
color_cells_by = "cluster",
label_groups_by_cluster=FALSE,
label_leaves=FALSE,
label_branch_points=FALSE)
cds <- order_cells(cds, root_cells = colnames(cds[,clusters(cds) == 2]))
plot_cells(cds,
color_cells_by = "pseudotime",
group_cells_by = "cluster",
label_cell_groups = FALSE,
label_groups_by_cluster=FALSE,
label_leaves=FALSE,
label_branch_points=FALSE,
label_roots = FALSE,
trajectory_graph_color = "grey60")
ciliated_cds_pr_test_res <- graph_test(cds, neighbor_graph="principal_graph", cores=4)Warning: mc.cores > 1 is not supported on Windows due to limitation of mc*apply() functions.
mc.core is set to 1.